STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2977PFAM: protein of unknown function DUF362; KEGG: bth:BT_0776 hypothetical protein; IMG reference gene:2503008704; PFAM: Domain of unknown function (DUF362). (301 aa)    
Predicted Functional Partners:
Dalk_2976
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pdi:BDI_0775 ferredoxin-type protein; IMG reference gene:2503008703.
 
     0.959
Dalk_4626
Protein of unknown function DUF362; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: gsu:GSU0494 iron-sulfur cluster-binding protein; IMG reference gene:2503010382; PFAM: Domain of unknown function (DUF362).
 
     0.694
Dalk_1152
Protein of unknown function DUF362; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: cth:Cthe_1172 hypothetical protein; IMG reference gene:2503006854; PFAM: Domain of unknown function (DUF362).
 
     0.619
Dalk_0886
PFAM: aldo/keto reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gsu:GSU1370 aldo/keto reductase family oxidoreductase; IMG reference gene:2503006587; PFAM: Aldo/keto reductase family.
 
     0.423
Dalk_2978
PFAM: glycosyl transferase family 2; KEGG: gur:Gura_1323 glycosyl transferase family protein; IMG reference gene:2503008705; PFAM: Glycosyl transferase family 2.
       0.421
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.