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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_3000KEGG: dde:Dde_2624 hypothetical protein; IMG reference gene:2503008727; PFAM: Uncharacterized protein conserved in bacteria (DUF2064). (228 aa)    
Predicted Functional Partners:
Dalk_2999
PFAM: glycosyl transferase family 2; KEGG: npu:Npun_R3473 glycosyl transferase family protein; IMG reference gene:2503008726; PFAM: Glycosyl transferase family 2.
     0.995
Dalk_3002
PFAM: SNARE associated Golgi protein; KEGG: dde:Dde_1462 hypothetical protein; IMG reference gene:2503008729; PFAM: SNARE associated Golgi protein.
 
     0.938
Dalk_3001
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dde:Dde_1463 mercuric reductase, putative; IMG reference gene:2503008728; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
 
   
 0.912
Dalk_5015
TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1; KEGG: sfu:Sfum_2962 purine nucleoside phosphorylase I, inosine and guanosine-specific; IMG reference gene:2503010774; PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family.
    
 0.709
Dalk_4869
PFAM: fatty acid hydroxylase; KEGG: mgm:Mmc1_1104 sterol desaturase-related protein; IMG reference gene:2503010627; PFAM: Fatty acid hydroxylase superfamily.
 
     0.703
Dalk_3003
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dol:Dole_1876 heavy metal translocating P-type ATPase; IMG reference gene:2503008730; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protei [...]
       0.678
Dalk_1490
KEGG: pca:Pcar_1794 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; IMG reference gene:2503007200; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
   
   0.674
Dalk_3004
PFAM: Heavy metal transport/detoxification protein; KEGG: dol:Dole_1877 heavy metal transport/detoxification protein; IMG reference gene:2503008731; PFAM: Heavy-metal-associated domain.
       0.655
Dalk_4690
PFAM: protein of unknown function DUF1499; KEGG: esi:Exig_2884 hypothetical protein; IMG reference gene:2503010446; PFAM: Protein of unknown function (DUF1499).
 
     0.549
Dalk_2704
KEGG: maq:Maqu_3858 hypothetical protein; IMG reference gene:2503008427; PFAM: Protein of unknown function (DUF3047).
 
    0.509
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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