Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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Dalk_3003Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dol:Dole_1876 heavy metal translocating P-type ATPase; IMG reference gene:2503008730; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protei [...] (812 aa)    
Predicted Functional Partners:
Dalk_3004
PFAM: Heavy metal transport/detoxification protein; KEGG: dol:Dole_1877 heavy metal transport/detoxification protein; IMG reference gene:2503008731; PFAM: Heavy-metal-associated domain.
  
 
 0.979
Dalk_4145
PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: Peptidyl-prolyl cis-trans isomerase (ISS); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B); IMG reference gene:2503009891; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
 
   0.838
Dalk_5135
PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: noc:Noc_2251 peptidylprolyl isomerase; IMG reference gene:2503010894; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
 
   0.817
Dalk_2925
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dol:Dole_2701 ATPase, P-type (transporting), HAD superfamily, subfamily IC; IMG reference gene:2503008651; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium [...]
 
 
0.806
Dalk_3001
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dde:Dde_1463 mercuric reductase, putative; IMG reference gene:2503008728; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
     
 0.806
Dalk_2586
PFAM: protein of unknown function DUF156; KEGG: pca:Pcar_0892 hypothetical protein; IMG reference gene:2503008307; PFAM: Uncharacterised BCR, COG1937.
  
  
 0.797
Dalk_2169
PFAM: TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dol:Dole_2418 TPR repeat-containing protein; IMG reference gene:2503007889; PFAM: Tetratricopeptide repeat.
  
 0.783
Dalk_3615
KEGG: dol:Dole_0070 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; IMG reference gene:2503009347; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK.
 
 0.778
Dalk_4702
TIGRFAM: peptide methionine sulfoxide reductase; methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; Methionine sulfoxide reductase B; KEGG: pca:Pcar_2611 peptide methionine sulfoxide reductase; IMG reference gene:2503010458; PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase.
 
  
 0.773
Dalk_4242
TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: dol:Dole_0550 chaperonin GroEL; IMG reference gene:2503009989; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL.
    
 0.766
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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