STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_3119PFAM: Auxin Efflux Carrier; KEGG: sfu:Sfum_2093 auxin efflux carrier; IMG reference gene:2503008848; PFAM: Membrane transport protein. (308 aa)    
Predicted Functional Partners:
Dalk_0610
Malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; IMG reference gene:2503006311; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
  
  
 0.903
Dalk_3120
PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; KEGG: dol:Dole_2871 peptidase M16C associated domain-containing protein; IMG reference gene:2503008849; PFAM: Peptidase M16C associated; Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
       0.773
Dalk_3117
PFAM: macrophage migration inhibitory factor family protein; KEGG: pmt:PMT0503 ATLS1-like light-inducible protein; IMG reference gene:2503008846; PFAM: Macrophage migration inhibitory factor (MIF).
       0.613
Dalk_3403
PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: dol:Dole_2033 methenyltetrahydrofolate cyclohydrolase; IMG reference gene:2503009135; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain.
      
 0.613
Dalk_3118
PFAM: beta-lactamase domain protein; KEGG: dol:Dole_0336 beta-lactamase domain-containing protein; IMG reference gene:2503008847; PFAM: Metallo-beta-lactamase superfamily.
       0.594
Dalk_2328
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: gbm:Gbem_3150 glycerophosphoryl diester phosphodiesterase; IMG reference gene:2503008048; PFAM: Glycerophosphoryl diester phosphodiesterase family.
    
  0.503
Dalk_4069
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bth:BT_4726 glycerophosphoryl diester phosphodiesterase; IMG reference gene:2503009814; PFAM: Glycerophosphoryl diester phosphodiesterase family.
    
  0.503
Dalk_3121
KEGG: dol:Dole_2872 hypothetical protein; IMG reference gene:2503008850.
       0.491
Dalk_0252
PFAM: Ankyrin; KEGG: ankyrin repeat protein, putative; IMG reference gene:2503005948; PFAM: Ankyrin repeat.
   
 0.417
Dalk_0484
PFAM: Ankyrin; KEGG: hypothetical protein; IMG reference gene:2503006184; PFAM: Ankyrin repeat.
   
 0.417
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.