STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_3206TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: dol:Dole_1492 chaperone protein DnaJ; IMG reference gene:2503008935; PFAM: DnaJ domain; DnaJ central domain (4 repeats); DnaJ C terminal region; TIGRFAM: chaperone protein DnaJ. (366 aa)    
Predicted Functional Partners:
Dalk_3615
KEGG: dol:Dole_0070 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; IMG reference gene:2503009347; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK.
 0.997
Dalk_1138
2-alkenal reductase; PFAM: Heat shock protein 70; KEGG: cac:CAC0472 HSP70/DnaK family protein; IMG reference gene:2503006840; PFAM: Hsp70 protein.
 0.995
Dalk_3616
PFAM: GrpE protein; KEGG: pca:Pcar_0108 heat shock protein nucleotide exchange factor GrpE; IMG reference gene:2503009348; PFAM: GrpE.
 
 
 0.990
Dalk_4242
TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: dol:Dole_0550 chaperonin GroEL; IMG reference gene:2503009989; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL.
 
 0.983
Dalk_0766
KEGG: bph:Bphy_5540 putative DnaK-related protein (molecular chaperone); IMG reference gene:2503006467; PFAM: Hsp70 protein.
  
 0.982
Dalk_0767
KEGG: sfu:Sfum_0343 DnaK-related protein; IMG reference gene:2503006468; PFAM: DNA-K related protein; Hsp70 protein.
  
 0.982
Dalk_4977
KEGG: nth:Nther_2354 hypothetical protein; IMG reference gene:2503010736.
  
 0.967
Dalk_1906
PFAM: ribosomal protein S17; KEGG: tma:TM1491 30S ribosomal protein S17; IMG reference gene:2503007618; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17.
  
 
 0.960
Dalk_2088
KEGG: dol:Dole_2481 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; ATP-dependent Clp protease ATP-binding subunit clpA; SMART: AAA ATPase; IMG reference gene:2503007806; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent [...]
  
 0.957
Dalk_3434
ATP-dependent chaperone ClpB; KEGG: dol:Dole_2696 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; IMG reference gene:2503009166; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB.
  
 0.957
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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