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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_3225Putative carbon monoxide dehydrogenase nickel-insertion accessory protein CooC; KEGG: dol:Dole_2777 cobyrinic acid ac-diamide synthase; IMG reference gene:2503008954; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (251 aa)    
Predicted Functional Partners:
Dalk_0681
Bifunctional CO dehydrogenase/acetyl-CoA synthase, beta subunit; In acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex; IMG reference gene:2503006382; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit.
 
  
 0.944
Dalk_0679
Bifunctional CO dehydrogenase/acetyl-CoA synthase delta subunit; Part of a complex that catalyzes the cleavage of acetyl-CoA; IMG reference gene:2503006380; PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit.
 
  
 0.877
Dalk_3226
KEGG: dol:Dole_2773 hypothetical protein; IMG reference gene:2503008955; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit.
  
  
 0.858
Dalk_0682
Bifunctional CO dehydrogenase/acetyl-CoA synthase gamma subunit; Part of a complex that catalyzes the cleavage of acetyl-CoA; IMG reference gene:2503006383; PFAM: Putative Fe-S cluster; CO dehydrogenase/acetyl-CoA synthase delta subunit.
 
  
 0.846
Dalk_0680
Bifunctional CO dehydrogenase/acetyl-CoA synthase, alpha subunit; KEGG: dol:Dole_3185 carbon-monoxide dehydrogenase, catalytic subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; IMG reference gene:2503006381; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit.
 
   
 0.792
Dalk_2379
KEGG: dol:Dole_1461 carbon-monoxide dehydrogenase, catalytic subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; IMG reference gene:2503008099; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit.
 
   
 0.792
Dalk_0537
KEGG: dol:Dole_1990 hypothetical protein; IMG reference gene:2503006237.
 
  
 0.791
Dalk_3761
PFAM: Fe-S cluster domain protein; KEGG: dol:Dole_1915 Fe-S cluster domain-containing protein; IMG reference gene:2503009505; PFAM: Putative Fe-S cluster.
 
  
 0.769
Dalk_0684
KEGG: dsy:DSY2558 hypothetical protein; IMG reference gene:2503006385.
 
     0.765
Dalk_3223
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dol:Dole_2775 2-hydroxyglutaryl-CoA dehydratase D-component; IMG reference gene:2503008952; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
       0.732
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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