STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_3277PFAM: inner-membrane translocator; KEGG: reu:Reut_A1400 inner-membrane translocator; IMG reference gene:2503009007; PFAM: Branched-chain amino acid transport system / permease component. (316 aa)    
Predicted Functional Partners:
Dalk_3276
PFAM: inner-membrane translocator; KEGG: rpc:RPC_4169 inner-membrane translocator; IMG reference gene:2503009006; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.999
Dalk_3278
KEGG: rpe:RPE_4221 ABC transporter, periplasmic branched chain amino acid binding protein; IMG reference gene:2503009008.
 
 
 0.995
Dalk_4902
PFAM: inner-membrane translocator; KEGG: cau:Caur_3638 inner-membrane translocator; IMG reference gene:2503010660; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.995
Dalk_1990
PFAM: inner-membrane translocator; KEGG: stp:Strop_1805 inner-membrane translocator; IMG reference gene:2503007707; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.994
Dalk_2917
PFAM: inner-membrane translocator; KEGG: mpo:Mpop_3556 inner-membrane translocator; IMG reference gene:2503008643; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.994
Dalk_4761
PFAM: inner-membrane translocator; KEGG: rpt:Rpal_4886 inner-membrane translocator; IMG reference gene:2503010518; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.990
Dalk_0069
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3500 inner-membrane translocator; IMG reference gene:2503005764; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.987
Dalk_3274
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_3165 ABC transporter related; IMG reference gene:2503009004; PFAM: ABC transporter.
 
 
 0.987
Dalk_3103
PFAM: inner-membrane translocator; KEGG: kcr:Kcr_1254 ABC-type branched-chain amino acid transport system, permease component; IMG reference gene:2503008832; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.981
Dalk_3275
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1571 ABC transporter related; IMG reference gene:2503009005; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
 0.979
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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