STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_3398PFAM: protein of unknown function DUF362; KEGG: pca:Pcar_2517 putative iron-sulfur cluster-binding protein; IMG reference gene:2503009130; PFAM: Domain of unknown function (DUF362). (265 aa)    
Predicted Functional Partners:
Dalk_0535
PFAM: protein of unknown function DUF362; KEGG: scl:sce2567 hypothetical protein; IMG reference gene:2503006235; PFAM: Domain of unknown function (DUF362).
  
     0.671
Dalk_4626
Protein of unknown function DUF362; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: gsu:GSU0494 iron-sulfur cluster-binding protein; IMG reference gene:2503010382; PFAM: Domain of unknown function (DUF362).
 
     0.618
Dalk_1152
Protein of unknown function DUF362; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: cth:Cthe_1172 hypothetical protein; IMG reference gene:2503006854; PFAM: Domain of unknown function (DUF362).
 
     0.609
Dalk_4871
PFAM: Protein of unknown function DUF166; KEGG: dol:Dole_1050 hypothetical protein; IMG reference gene:2503010629; PFAM: Uncharacterized ArCR, COG1810.
  
     0.552
Dalk_3399
PFAM: NMT1/THI5 like domain protein; KEGG: hau:Haur_2932 NMT1/THI5-like domain-containing protein; IMG reference gene:2503009131; PFAM: NMT1/THI5 like.
       0.514
Dalk_3400
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mac:MA1270 sensory transduction histidine kinase; IMG reference gene:2503009132; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
       0.514
Dalk_3401
PFAM: response regulator receiver; KEGG: ava:Ava_4344 response regulator receiver domain-containing protein; IMG reference gene:2503009133; PFAM: Response regulator receiver domain.
       0.514
Dalk_2976
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pdi:BDI_0775 ferredoxin-type protein; IMG reference gene:2503008703.
 
     0.504
Dalk_3402
KEGG: plt:Plut_1351 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; IMG reference gene:2503009134; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
       0.498
Dalk_3397
PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: gbm:Gbem_2290 PhoH family protein; IMG reference gene:2503009129; PFAM: PhoH-like protein.
       0.482
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.