STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_3533KEGG: cts:Ctha_2442 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; IMG reference gene:2503009265; PFAM: Magnesium chelatase, subunit ChlI. (343 aa)    
Predicted Functional Partners:
Dalk_3532
KEGG: ppd:Ppro_1261 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; IMG reference gene:2503009264; PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain; TIGRFAM: cobaltochelatase subunit.
 
0.987
Dalk_3520
Cobaltochelatase; PFAM: CobN/magnesium chelatase; KEGG: dau:Daud_1219 cobaltochelatase; IMG reference gene:2503009252; PFAM: CobN/Magnesium Chelatase; TIGRFAM: magnesium chelatase, H subunit; cobaltochelatase, CobN subunit.
 
 
 0.973
Dalk_4060
Cobaltochelatase; PFAM: CobN/magnesium chelatase; KEGG: cts:Ctha_2445 cobaltochelatase; IMG reference gene:2503009805; PFAM: CobN/Magnesium Chelatase; TIGRFAM: magnesium chelatase, H subunit; cobaltochelatase, CobN subunit.
 
 
 0.973
Dalk_4064
Cobaltochelatase; PFAM: CobN/magnesium chelatase; KEGG: cts:Ctha_2441 cobaltochelatase; IMG reference gene:2503009809; PFAM: CobN/Magnesium Chelatase.
 
 
 0.973
Dalk_1505
PFAM: von Willebrand factor type A; KEGG: sun:SUN_2020 hypothetical protein; IMG reference gene:2503007215; PFAM: von Willebrand factor type A domain.
  
 0.860
Dalk_3471
PFAM: von Willebrand factor type A; KEGG: bvu:BVU_3289 aerotolerance-related membrane protein; IMG reference gene:2503009203; PFAM: von Willebrand factor type A domain.
  
 0.860
Dalk_3472
TIGRFAM: conserved hypothetical protein; PFAM: von Willebrand factor type A; KEGG: mca:MCA3085 BatB protein, putative; IMG reference gene:2503009204; PFAM: von Willebrand factor type A domain.
  
 0.860
Dalk_5030
PFAM: von Willebrand factor type A; KEGG: sun:SUN_2020 hypothetical protein; IMG reference gene:2503010789; PFAM: von Willebrand factor type A domain.
  
 0.860
Dalk_4038
Putative uncharacterized protein; PFAM: Rab GTPase activator; amine oxidase; FAD dependent oxidoreductase; KEGG: dol:Dole_2352 FAD dependent oxidoreductase; IMG reference gene:2503009783; PFAM: Flavin containing amine oxidoreductase.
 
 
 0.846
Dalk_3535
PFAM: ABC-2 type transporter; KEGG: ppd:Ppro_1264 ABC-2 type transporter; IMG reference gene:2503009267; PFAM: ABC-2 type transporter; TIGRFAM: ABC-2 type transporter, NodJ family.
 
     0.832
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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