STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_3550Hypothetical protein Dalk_3550; IMG reference gene:2503009282. (149 aa)    
Predicted Functional Partners:
Dalk_3549
Hypothetical protein Dalk_3549; IMG reference gene:2503009281.
       0.773
Dalk_3551
PFAM: protein of unknown function DUF1320; KEGG: sfu:Sfum_1884 protein of unknown function DUF1320; IMG reference gene:2503009283; PFAM: Protein of unknown function (DUF1320).
       0.773
Dalk_3552
KEGG: btr:Btr_2623 hypothetical protein; IMG reference gene:2503009284.
       0.773
Dalk_3553
Hypothetical protein Dalk_3553; IMG reference gene:2503009285.
       0.678
Dalk_3548
KEGG: sfu:Sfum_1887 hypothetical protein; IMG reference gene:2503009280.
       0.671
Dalk_3554
KEGG: cvi:CV_2135 hypothetical protein; IMG reference gene:2503009286.
       0.591
Dalk_3543
Hypothetical protein Dalk_3543; IMG reference gene:2503009275.
       0.561
Dalk_3544
KEGG: glo:Glov_2981 hypothetical protein; IMG reference gene:2503009276.
       0.561
Dalk_3545
Hypothetical protein Dalk_3545; IMG reference gene:2503009277.
       0.561
Dalk_3546
TIGRFAM: phage tape measure protein; KEGG: rsp:RSP_3355 putative tape measure protein; IMG reference gene:2503009278; TIGRFAM: tape measure domain.
       0.561
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.