STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_3970Hypothetical protein Dalk_3970; IMG reference gene:2503009715. (111 aa)    
Predicted Functional Partners:
Dalk_3969
KEGG: mrd:Mrad2831_5695 hypothetical protein; IMG reference gene:2503009714.
       0.741
Dalk_3966
Hypothetical protein Dalk_3966; IMG reference gene:2503009711.
       0.629
Dalk_3967
Hypothetical protein Dalk_3967; IMG reference gene:2503009712.
       0.629
Dalk_3968
PFAM: protein of unknown function DUF264; KEGG: mms:mma_2206 hypothetical protein; IMG reference gene:2503009713; PFAM: Terminase-like family.
       0.629
Dalk_3971
Hypothetical protein Dalk_3971; KEGG: eta:ETA_22940 probable protein TolA (translocation of group A colicins); IMG reference gene:2503009716.
       0.543
Dalk_3972
KEGG: hso:HS_1377 hypothetical protein; IMG reference gene:2503009717.
       0.543
Dalk_3973
Hypothetical protein Dalk_3973; IMG reference gene:2503009718.
       0.439
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.