STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_4007PFAM: Sel1 domain protein repeat-containing protein; KEGG: aas:Aasi_0851 hypothetical protein; IMG reference gene:2503009752; PFAM: Sel1 repeat. (210 aa)    
Predicted Functional Partners:
Dalk_2206
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ava:Ava_3503 AAA ATPase, central region; IMG reference gene:2503007926; PFAM: ATPase family associated with various cellular activities (AAA).
   
 0.868
Dalk_4807
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dol:Dole_0240 ATPase central domain-containing protein; IMG reference gene:2503010564; PFAM: ATPase family associated with various cellular activities (AAA).
   
 0.868
Dalk_0766
KEGG: bph:Bphy_5540 putative DnaK-related protein (molecular chaperone); IMG reference gene:2503006467; PFAM: Hsp70 protein.
   
 0.813
Dalk_0767
KEGG: sfu:Sfum_0343 DnaK-related protein; IMG reference gene:2503006468; PFAM: DNA-K related protein; Hsp70 protein.
   
 0.813
Dalk_1138
2-alkenal reductase; PFAM: Heat shock protein 70; KEGG: cac:CAC0472 HSP70/DnaK family protein; IMG reference gene:2503006840; PFAM: Hsp70 protein.
   
 0.813
Dalk_3615
KEGG: dol:Dole_0070 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; IMG reference gene:2503009347; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK.
   
 0.813
Dalk_4977
KEGG: nth:Nther_2354 hypothetical protein; IMG reference gene:2503010736.
   
 0.813
Dalk_2014
PFAM: Sel1 domain protein repeat-containing protein; KEGG: nmu:Nmul_A0104 Sel1 repeat-containing protein; IMG reference gene:2503007731; PFAM: Sel1 repeat.
  
     0.775
Dalk_1076
PFAM: phospholipid/glycerol acyltransferase; KEGG: dol:Dole_2499 1-acylglycerol-3-phosphate O-acyltransferase; IMG reference gene:2503006777; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
    
  0.769
Dalk_1382
PFAM: phospholipid/glycerol acyltransferase; KEGG: maq:Maqu_1616 phospholipid/glycerol acyltransferase; IMG reference gene:2503007087; PFAM: Acyltransferase.
    
  0.769
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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