STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_4042Hypothetical protein; IMG reference gene:2503009787. (215 aa)    
Predicted Functional Partners:
Dalk_4039
PFAM: FAD linked oxidase domain protein; KEGG: dol:Dole_0769 FAD linked oxidase domain-containing protein; IMG reference gene:2503009784; PFAM: FAD binding domain.
       0.773
Dalk_4040
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sat:SYN_01166 Fe-S oxidoreductase; IMG reference gene:2503009785; PFAM: Cysteine-rich domain.
       0.773
Dalk_4041
PFAM: FAD linked oxidase domain protein; KEGG: rci:RCIX2225 putative (S)-2-hydroxy-acid dehydrogenase; IMG reference gene:2503009786; PFAM: FAD binding domain.
       0.773
Dalk_4038
Putative uncharacterized protein; PFAM: Rab GTPase activator; amine oxidase; FAD dependent oxidoreductase; KEGG: dol:Dole_2352 FAD dependent oxidoreductase; IMG reference gene:2503009783; PFAM: Flavin containing amine oxidoreductase.
       0.768
Dalk_4036
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: tte:TTE0547 electron transfer flavoprotein subunit alpha; IMG reference gene:2503009781; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
       0.751
Dalk_4037
KEGG: dol:Dole_3106 hypothetical protein; IMG reference gene:2503009782.
       0.751
Dalk_4035
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: hmo:HM1_2618 electron transfer flavoprotein, beta subunit; IMG reference gene:2503009780; PFAM: Electron transfer flavoprotein domain.
       0.740
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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