Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
Dalk_4100PFAM: protein of unknown function DUF52; KEGG: dol:Dole_0299 hypothetical protein; IMG reference gene:2503009845; PFAM: Memo-like protein. (282 aa)    
Predicted Functional Partners:
Dalk_1495
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gsu:GSU1728 hypothetical protein; IMG reference gene:2503007205; PFAM: Radical SAM superfamily.
 
     0.784
Dalk_3955
PFAM: Radical SAM domain protein; KEGG: dol:Dole_2431 radical SAM domain-containing protein; IMG reference gene:2503009700; PFAM: Radical SAM superfamily.
 
     0.779
Dalk_3956
PFAM: AMMECR1 domain protein; protein of unknown function DUF52; KEGG: mgm:Mmc1_2152 protein of unknown function DUF52; IMG reference gene:2503009701; PFAM: Memo-like protein; AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family.
 
   
0.703
Dalk_4099
TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: dol:Dole_2134 small GTP-binding protein; IMG reference gene:2503009844; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain.
       0.511
Dalk_0550
TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: cytidylyltransferase; FAD synthetase; Riboflavin kinase; KEGG: dol:Dole_2234 riboflavin biosynthesis protein RibF; IMG reference gene:2503006251; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase.
   
   0.467
Dalk_4101
KEGG: hau:Haur_2253 hypothetical protein; IMG reference gene:2503009846.
       0.448
Dalk_4097
PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: sat:SYN_01990 recombination factor protein RarA; IMG reference gene:2503009842; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA).
       0.443
Dalk_4098
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mtp:Mthe_0325 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; IMG reference gene:2503009843; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain.
       0.419
Dalk_3328
TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: dol:Dole_0775 carbohydrate kinase, YjeF related protein; IMG reference gene:2503009058; PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region.
   
   0.412
Dalk_3936
PFAM: protein of unknown function DUF101; KEGG: sat:SYN_02047 putative cytoplasmic protein; IMG reference gene:2503009680; PFAM: Archease protein family (DUF101/UPF0211).
  
     0.405
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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