Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Dalk_4366PFAM: TPR repeat-containing protein; Sporulation domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pgn:PGN_0972 TPR domain protein; IMG reference gene:2503010114; PFAM: Tetratricopeptide repeat; Sporulation related domain. (382 aa)    
Predicted Functional Partners:
Dalk_1507
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_3996 tetratricopeptide TPR_2; IMG reference gene:2503007217; PFAM: Tetratricopeptide repeat.
 
   
 0.824
Dalk_2214
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gbm:Gbem_2933 tetratricopeptide TPR_2 repeat protein; IMG reference gene:2503007934; PFAM: Tetratricopeptide repeat.
 
   
 0.798
Dalk_4348
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvu:DVU2763 TPR/GGDEF domain-containing protein; IMG reference gene:2503010096; PFAM: Tetratricopeptide repeat.
 
     0.776
Dalk_4399
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dol:Dole_2747 TPR repeat-containing protein; IMG reference gene:2503010147; PFAM: Tetratricopeptide repeat.
 
     0.776
Dalk_3174
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sfu:Sfum_1870 tetratricopeptide TPR_2 repeat protein; IMG reference gene:2503008903; PFAM: Tetratricopeptide repeat.
 
     0.767
Dalk_2217
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dol:Dole_2418 TPR repeat-containing protein; IMG reference gene:2503007937; PFAM: Tetratricopeptide repeat.
 
     0.766
Dalk_3075
PFAM: protein of unknown function DUF34; KEGG: dau:Daud_0497 protein of unknown function DUF34; IMG reference gene:2503008803; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family.
  
    0.766
Dalk_3778
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gvi:gll1119 unknown protein; IMG reference gene:2503009522.
 
     0.758
Dalk_2168
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sfu:Sfum_1870 tetratricopeptide TPR_2 repeat protein; IMG reference gene:2503007888.
 
     0.756
Dalk_2170
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dol:Dole_2417 TPR repeat-containing protein; IMG reference gene:2503007890; PFAM: Tetratricopeptide repeat.
 
     0.744
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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