STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_4389PFAM: ATP-NAD/AcoX kinase; KEGG: dol:Dole_2582 ATP-NAD/AcoX kinase; IMG reference gene:2503010137; PFAM: ATP-NAD kinase. (284 aa)    
Predicted Functional Partners:
Dalk_4127
KEGG: gbm:Gbem_3777 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; IMG reference gene:2503009873; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain.
  
 
 0.886
Dalk_1246
PFAM: inositol monophosphatase; KEGG: dol:Dole_0004 inositol-phosphate phosphatase; IMG reference gene:2503006949; PFAM: Inositol monophosphatase family.
   
 0.884
Dalk_2633
NAD+ synthetase; KEGG: aba:Acid345_2524 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; IMG reference gene:2503008355; PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase.
 
  
 0.881
Dalk_3486
TIGRFAM: cytidyltransferase-related domain protein; KEGG: npu:Npun_F0631 ATPase/kinase involved in NAD metabolism; IMG reference gene:2503009218; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain.
  
 
 0.866
Dalk_4950
TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; KEGG: ote:Oter_1045 NAD+ synthetase; IMG reference gene:2503010709; PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase.
    
 0.865
Dalk_4391
TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: cth:Cthe_2941 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; IMG reference gene:2503010139; PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.
     
 0.826
Dalk_3718
TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: dol:Dole_2516 DNA repair protein RecN; IMG reference gene:2503009462; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN.
 
  
 0.799
Dalk_1098
PFAM: Silent information regulator protein Sir2; KEGG: sfu:Sfum_0751 silent information regulator protein Sir2; IMG reference gene:2503006799; PFAM: Sir2 family.
  
 
 0.777
Dalk_1874
PFAM: Silent information regulator protein Sir2; KEGG: sat:SYN_00042 sir2 family protein; IMG reference gene:2503007586; PFAM: Sir2 family.
  
 
 0.777
Dalk_4390
KEGG: dol:Dole_3190 alpha/beta hydrolase family protein; IMG reference gene:2503010138.
       0.773
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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