STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_4463PFAM: regulatory protein TetR; KEGG: dol:Dole_0228 TetR family transcriptional regulator; IMG reference gene:2503010214; PFAM: Bacterial regulatory proteins, tetR family. (208 aa)    
Predicted Functional Partners:
Dalk_4165
PFAM: regulatory protein TetR; KEGG: dol:Dole_1323 TetR family transcriptional regulator; IMG reference gene:2503009911; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.711
Dalk_5018
PFAM: regulatory protein TetR; KEGG: amt:Amet_0314 TetR family transcriptional regulator; IMG reference gene:2503010777; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.692
Dalk_4836
PFAM: regulatory protein TetR; KEGG: dde:Dde_0960 TetR family transcriptional regulator; IMG reference gene:2503010594; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.678
Dalk_4166
PFAM: regulatory protein TetR; KEGG: dol:Dole_2974 TetR family transcriptional regulator; IMG reference gene:2503009912; PFAM: NAD dependent epimerase/dehydratase family; Bacterial regulatory proteins, tetR family.
  
     0.676
Dalk_1946
PFAM: regulatory protein TetR; KEGG: dol:Dole_0457 TetR family transcriptional regulator; IMG reference gene:2503007663; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.648
Dalk_4845
PFAM: regulatory protein TetR; KEGG: sus:Acid_5697 TetR family transcriptional regulator; IMG reference gene:2503010603; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.647
Dalk_0757
PFAM: regulatory protein TetR; KEGG: pla:Plav_1079 TetR family transcriptional regulator; IMG reference gene:2503006458; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.629
Dalk_4442
PFAM: regulatory protein TetR; KEGG: dol:Dole_0167 TetR family transcriptional regulator; IMG reference gene:2503010193; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.624
Dalk_3358
PFAM: regulatory protein TetR; KEGG: bbr:BB3154 TetR family transcriptional regulator; IMG reference gene:2503009088; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.615
Dalk_4464
Hypothetical protein Dalk_4464; IMG reference gene:2503010215.
       0.603
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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