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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_4530KEGG: bpt:Bpet0956 hypothetical protein; IMG reference gene:2503010281. (119 aa)    
Predicted Functional Partners:
Dalk_4531
Hypothetical protein Dalk_4531; IMG reference gene:2503010282.
       0.773
Dalk_4532
Hypothetical protein Dalk_4532; IMG reference gene:2503010283.
       0.773
Dalk_4533
Hypothetical protein Dalk_4533; IMG reference gene:2503010284.
       0.773
Dalk_4534
Hypothetical protein Dalk_4534; IMG reference gene:2503010285.
       0.773
Dalk_4535
Hypothetical protein Dalk_4535; IMG reference gene:2503010286.
       0.773
Dalk_4529
Hypothetical protein Dalk_4529; IMG reference gene:2503010280.
       0.417
Dalk_4536
Hypothetical protein Dalk_4536; IMG reference gene:2503010287.
       0.415
Dalk_4537
Hypothetical protein Dalk_4537; IMG reference gene:2503010288.
       0.415
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.