STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_4575Hypothetical protein Dalk_4575; IMG reference gene:2503010331. (161 aa)    
Predicted Functional Partners:
Dalk_4576
KEGG: kpn:KPN_pKPN4p07119 hypothetical protein; IMG reference gene:2503010332.
       0.752
Dalk_4574
Hypothetical protein Dalk_4574; IMG reference gene:2503010330.
       0.615
Dalk_4577
Hypothetical protein Dalk_4577; IMG reference gene:2503010333.
       0.599
Dalk_4578
Hypothetical protein Dalk_4578; IMG reference gene:2503010334.
       0.565
Dalk_4579
KEGG: ent:Ent638_0475 hypothetical protein; IMG reference gene:2503010335; PFAM: Protein of unknown function (DUF987).
       0.565
Dalk_4580
Hypothetical protein Dalk_4580; IMG reference gene:2503010336.
       0.525
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.