Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Dalk_4591Hypothetical protein Dalk_4591; IMG reference gene:2503010347. (94 aa)    
Predicted Functional Partners:
Dalk_4593
Hypothetical protein Dalk_4593; IMG reference gene:2503010349.
       0.497
Dalk_4594
Hypothetical protein Dalk_4594; IMG reference gene:2503010350.
       0.497
Dalk_4595
Hypothetical protein Dalk_4595; IMG reference gene:2503010351.
       0.497
Dalk_4596
Hypothetical protein Dalk_4596; IMG reference gene:2503010352.
       0.497
Dalk_4597
KEGG: bmj:BMULJ_01390 putative bacteriophage protein; IMG reference gene:2503010353.
       0.497
Dalk_4598
KEGG: aby:ABAYE1231 hypothetical protein; IMG reference gene:2503010354.
       0.490
Dalk_4599
Hypothetical protein Dalk_4599; IMG reference gene:2503010355.
       0.490
Dalk_4600
Hypothetical protein Dalk_4600; IMG reference gene:2503010356.
       0.490
Dalk_4601
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: net:Neut_2461 single-strand binding protein; IMG reference gene:2503010357; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
       0.490
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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