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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_4606Hypothetical protein Dalk_4606; IMG reference gene:2503010362. (66 aa)    
Predicted Functional Partners:
Dalk_4607
Hypothetical protein Dalk_4607; IMG reference gene:2503010363.
       0.773
Dalk_4608
Hypothetical protein Dalk_4608; IMG reference gene:2503010364.
       0.773
Dalk_4609
KEGG: Os08g0419200; hypothetical protein; IMG reference gene:2503010365.
       0.773
Dalk_4610
Hypothetical protein Dalk_4610; IMG reference gene:2503010366.
       0.773
Dalk_4611
KEGG: kpe:KPK_3135 hypothetical protein; IMG reference gene:2503010367.
       0.773
Dalk_4612
Hypothetical protein Dalk_4612; IMG reference gene:2503010368.
       0.773
Dalk_4613
Hypothetical protein Dalk_4613; IMG reference gene:2503010369.
       0.773
Dalk_4614
PFAM: DNA N-6-adenine-methyltransferase; KEGG: mms:mma_2215 phage N-6-adenine methyltransferase; IMG reference gene:2503010370; PFAM: DNA N-6-adenine-methyltransferase (Dam); TIGRFAM: phage N-6-adenine-methyltransferase.
       0.693
Dalk_4615
KEGG: dol:Dole_0418 hypothetical protein; IMG reference gene:2503010371.
       0.488
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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