close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_4763PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH2194 ABC transporter ATP-binding protein; IMG reference gene:2503010520; PFAM: ABC transporter. (240 aa)    
Predicted Functional Partners:
Dalk_4761
PFAM: inner-membrane translocator; KEGG: rpt:Rpal_4886 inner-membrane translocator; IMG reference gene:2503010518; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.989
Dalk_2917
PFAM: inner-membrane translocator; KEGG: mpo:Mpop_3556 inner-membrane translocator; IMG reference gene:2503008643; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.986
Dalk_4762
PFAM: inner-membrane translocator; KEGG: cti:RALTA_A1799 putative ABC transporteur, membrane component; IMG reference gene:2503010519; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.984
Dalk_4902
PFAM: inner-membrane translocator; KEGG: cau:Caur_3638 inner-membrane translocator; IMG reference gene:2503010660; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.975
Dalk_0069
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3500 inner-membrane translocator; IMG reference gene:2503005764; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.974
Dalk_1990
PFAM: inner-membrane translocator; KEGG: stp:Strop_1805 inner-membrane translocator; IMG reference gene:2503007707; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.972
Dalk_0701
PFAM: inner-membrane translocator; KEGG: kcr:Kcr_1254 ABC-type branched-chain amino acid transport system, permease component; IMG reference gene:2503006402; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.956
Dalk_3276
PFAM: inner-membrane translocator; KEGG: rpc:RPC_4169 inner-membrane translocator; IMG reference gene:2503009006; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.949
Dalk_4765
PFAM: Extracellular ligand-binding receptor; KEGG: rpb:RPB_4204 extracellular ligand-binding receptor; IMG reference gene:2503010522; PFAM: Receptor family ligand binding region.
 
 
 0.946
Dalk_3504
PFAM: inner-membrane translocator; KEGG: dol:Dole_3011 inner-membrane translocator; IMG reference gene:2503009236; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.942
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.