STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_4869PFAM: fatty acid hydroxylase; KEGG: mgm:Mmc1_1104 sterol desaturase-related protein; IMG reference gene:2503010627; PFAM: Fatty acid hydroxylase superfamily. (272 aa)    
Predicted Functional Partners:
Dalk_4829
KEGG: dol:Dole_1413 hypothetical protein; IMG reference gene:2503010587; PFAM: PAP2 superfamily.
  
 0.975
Dalk_0344
KEGG: amu:Amuc_0525 cycloartenol synthase-like protein; IMG reference gene:2503006041.
   
 0.963
Dalk_0796
PFAM: diacylglycerol kinase catalytic region; KEGG: amt:Amet_4787 diacylglycerol kinase, catalytic region; IMG reference gene:2503006497; PFAM: Diacylglycerol kinase catalytic domain; Diacylglycerol kinase accessory domain.
   
 0.812
Dalk_3191
PFAM: short-chain dehydrogenase/reductase SDR; protein of unknown function DUF35; Sterol-binding domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KR domain protein; KEGG: dol:Dole_1550 short-chain dehydrogenase/reductase SDR; IMG reference gene:2503008920; PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; DUF35 OB-fold domain; short chain dehydrogenase; SCP-2 sterol transfer family.
  
 
 0.786
Dalk_3002
PFAM: SNARE associated Golgi protein; KEGG: dde:Dde_1462 hypothetical protein; IMG reference gene:2503008729; PFAM: SNARE associated Golgi protein.
 
   
 0.755
Dalk_2999
PFAM: glycosyl transferase family 2; KEGG: npu:Npun_R3473 glycosyl transferase family protein; IMG reference gene:2503008726; PFAM: Glycosyl transferase family 2.
 
 
   0.721
Dalk_3000
KEGG: dde:Dde_2624 hypothetical protein; IMG reference gene:2503008727; PFAM: Uncharacterized protein conserved in bacteria (DUF2064).
 
     0.703
Dalk_3911
PFAM: protein of unknown function DUF35; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: dol:Dole_1550 short-chain dehydrogenase/reductase SDR; IMG reference gene:2503009655; PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal.
   
 
 0.646
Dalk_4868
PFAM: beta-lactamase domain protein; KEGG: dol:Dole_1870 beta-lactamase domain-containing protein; IMG reference gene:2503010626; PFAM: Metallo-beta-lactamase superfamily.
       0.639
Dalk_0880
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: nmu:Nmul_A2281 NAD-dependent epimerase/dehydratase; IMG reference gene:2503006581; PFAM: NAD dependent epimerase/dehydratase family.
   
 0.612
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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