Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Dalk_4881 | Dalk_4882 | PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C7183 TetR family transcriptional regulator; IMG reference gene:2503010639; PFAM: Bacterial regulatory proteins, tetR family. | Hypothetical protein Dalk_4882; IMG reference gene:2503010640. | 0.453 |
Dalk_4881 | Dalk_4883 | PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C7183 TetR family transcriptional regulator; IMG reference gene:2503010639; PFAM: Bacterial regulatory proteins, tetR family. | KEGG: ter:Tery_1544 ATPase-like protein; IMG reference gene:2503010641. | 0.453 |
Dalk_4882 | Dalk_4881 | Hypothetical protein Dalk_4882; IMG reference gene:2503010640. | PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C7183 TetR family transcriptional regulator; IMG reference gene:2503010639; PFAM: Bacterial regulatory proteins, tetR family. | 0.453 |
Dalk_4882 | Dalk_4883 | Hypothetical protein Dalk_4882; IMG reference gene:2503010640. | KEGG: ter:Tery_1544 ATPase-like protein; IMG reference gene:2503010641. | 0.792 |
Dalk_4882 | Dalk_4884 | Hypothetical protein Dalk_4882; IMG reference gene:2503010640. | Transcriptional regulator, XRE family; KEGG: vfm:VFMJ11_A0080 hypothetical protein; IMG reference gene:2503010642. | 0.452 |
Dalk_4882 | Dalk_4885 | Hypothetical protein Dalk_4882; IMG reference gene:2503010640. | KEGG: tcx:Tcr_2182 hypothetical protein; IMG reference gene:2503010643; PFAM: Protein of unknown function (DUF2975). | 0.414 |
Dalk_4883 | Dalk_4881 | KEGG: ter:Tery_1544 ATPase-like protein; IMG reference gene:2503010641. | PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C7183 TetR family transcriptional regulator; IMG reference gene:2503010639; PFAM: Bacterial regulatory proteins, tetR family. | 0.453 |
Dalk_4883 | Dalk_4882 | KEGG: ter:Tery_1544 ATPase-like protein; IMG reference gene:2503010641. | Hypothetical protein Dalk_4882; IMG reference gene:2503010640. | 0.792 |
Dalk_4883 | Dalk_4884 | KEGG: ter:Tery_1544 ATPase-like protein; IMG reference gene:2503010641. | Transcriptional regulator, XRE family; KEGG: vfm:VFMJ11_A0080 hypothetical protein; IMG reference gene:2503010642. | 0.452 |
Dalk_4883 | Dalk_4885 | KEGG: ter:Tery_1544 ATPase-like protein; IMG reference gene:2503010641. | KEGG: tcx:Tcr_2182 hypothetical protein; IMG reference gene:2503010643; PFAM: Protein of unknown function (DUF2975). | 0.414 |
Dalk_4884 | Dalk_4882 | Transcriptional regulator, XRE family; KEGG: vfm:VFMJ11_A0080 hypothetical protein; IMG reference gene:2503010642. | Hypothetical protein Dalk_4882; IMG reference gene:2503010640. | 0.452 |
Dalk_4884 | Dalk_4883 | Transcriptional regulator, XRE family; KEGG: vfm:VFMJ11_A0080 hypothetical protein; IMG reference gene:2503010642. | KEGG: ter:Tery_1544 ATPase-like protein; IMG reference gene:2503010641. | 0.452 |
Dalk_4884 | Dalk_4885 | Transcriptional regulator, XRE family; KEGG: vfm:VFMJ11_A0080 hypothetical protein; IMG reference gene:2503010642. | KEGG: tcx:Tcr_2182 hypothetical protein; IMG reference gene:2503010643; PFAM: Protein of unknown function (DUF2975). | 0.879 |
Dalk_4885 | Dalk_4882 | KEGG: tcx:Tcr_2182 hypothetical protein; IMG reference gene:2503010643; PFAM: Protein of unknown function (DUF2975). | Hypothetical protein Dalk_4882; IMG reference gene:2503010640. | 0.414 |
Dalk_4885 | Dalk_4883 | KEGG: tcx:Tcr_2182 hypothetical protein; IMG reference gene:2503010643; PFAM: Protein of unknown function (DUF2975). | KEGG: ter:Tery_1544 ATPase-like protein; IMG reference gene:2503010641. | 0.414 |
Dalk_4885 | Dalk_4884 | KEGG: tcx:Tcr_2182 hypothetical protein; IMG reference gene:2503010643; PFAM: Protein of unknown function (DUF2975). | Transcriptional regulator, XRE family; KEGG: vfm:VFMJ11_A0080 hypothetical protein; IMG reference gene:2503010642. | 0.879 |