STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_4897TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: dol:Dole_2771 putative CoA-substrate-specific enzyme activase; IMG reference gene:2503010655; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; benzoyl-CoA reductase, bcr type, subunit D. (262 aa)    
Predicted Functional Partners:
Dalk_4896
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dol:Dole_2770 2-hydroxyglutaryl-CoA dehydratase D-component; IMG reference gene:2503010654; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 
 0.971
Dalk_4894
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dol:Dole_2769 2-hydroxyglutaryl-CoA dehydratase D-component; IMG reference gene:2503010652; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 0.966
Dalk_4895
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dol:Dole_2770 2-hydroxyglutaryl-CoA dehydratase D-component; IMG reference gene:2503010653; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 
 0.951
Dalk_3224
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dol:Dole_2774 2-hydroxyglutaryl-CoA dehydratase D-component; IMG reference gene:2503008953; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 0.935
Dalk_3839
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dol:Dole_2769 2-hydroxyglutaryl-CoA dehydratase D-component; IMG reference gene:2503009583; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 0.919
Dalk_3846
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dol:Dole_2769 2-hydroxyglutaryl-CoA dehydratase D-component; IMG reference gene:2503009590; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 0.919
Dalk_2772
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: afu:AF1957 2-hydroxyglutaryl-CoA dehydratase, subunit beta (HgdB); IMG reference gene:2503008495; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 0.917
Dalk_2773
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: afu:AF1958 2-hydroxyglutaryl-CoA dehydratase, subunit alpha (HgdA); IMG reference gene:2503008496; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 
 0.907
Dalk_0250
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dol:Dole_0931 2-hydroxyglutaryl-CoA dehydratase D-component; IMG reference gene:2503005946; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 
 0.904
Dalk_3049
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dol:Dole_2775 2-hydroxyglutaryl-CoA dehydratase D-component; IMG reference gene:2503008776; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 
 0.902
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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