STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_5014PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sfu:Sfum_2961 amidohydrolase; IMG reference gene:2503010773; PFAM: Amidohydrolase family. (433 aa)    
Predicted Functional Partners:
Dalk_5015
TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1; KEGG: sfu:Sfum_2962 purine nucleoside phosphorylase I, inosine and guanosine-specific; IMG reference gene:2503010774; PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family.
 
  
 0.971
Dalk_3240
KEGG: tte:TTE2394 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; IMG reference gene:2503008969; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase.
 
  
 0.810
Dalk_2439
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sat:SYN_01991 chlorohydrolase/deaminase family protein; IMG reference gene:2503008160; PFAM: Amidohydrolase family.
 
  
 
0.769
Dalk_0215
Dihydropyrimidine dehydrogenase (NADP(+)); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD dependent oxidoreductase; Fe-S cluster domain protein; KEGG: dol:Dole_2825 electron transport complex, RnfABCDGE type, B subunit; IMG reference gene:2503005911; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Putative Fe-S cluster; 4Fe-4S binding domain.
  
 
  0.768
Dalk_2596
TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dol:Dole_2511 electron transport complex, RnfABCDGE type, B subunit; IMG reference gene:2503008317; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit.
  
 
  0.768
Dalk_0518
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; glutamate synthase alpha subunit domain protein; KEGG: sfu:Sfum_1723 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; IMG reference gene:2503006218; PFAM: Pyridine nucleotide-disulphide oxidoreductase; GXGXG motif.
  
 
 0.749
Dalk_4188
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: syp:SYNPCC7002_A2513 N-methylhydantoinase A; 5-oxoprolinase; IMG reference gene:2503009935; PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region.
    
  0.731
Dalk_5013
PFAM: protein of unknown function DUF161; KEGG: dvl:Dvul_0531 hypothetical protein; IMG reference gene:2503010772; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179).
       0.729
Dalk_2523
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_0824 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; IMG reference gene:2503008244; PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain; TIGRFAM: putative selenate reductase, YgfK subunit.
  
 
  0.612
Dalk_0800
TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: dol:Dole_1495 dihydroorotate dehydrogenase family protein; IMG reference gene:2503006501; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein.
  
 
 0.606
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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