STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_5018PFAM: regulatory protein TetR; KEGG: amt:Amet_0314 TetR family transcriptional regulator; IMG reference gene:2503010777; PFAM: Bacterial regulatory proteins, tetR family. (202 aa)    
Predicted Functional Partners:
Dalk_4639
PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YsiA domain protein; KEGG: sfu:Sfum_1401 transcriptional regulator, TetR family; IMG reference gene:2503010395; PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family.
  
     0.737
Dalk_3280
PFAM: regulatory protein TetR; KEGG: sat:SYN_02416 TetR family transcriptional regulator; IMG reference gene:2503009010; PFAM: Bacterial regulatory proteins, tetR family; YsiA-like protein, C-terminal region.
  
     0.732
Dalk_2545
PFAM: regulatory protein TetR; KEGG: gtn:GTNG_2616 transcriptional regulator TetR family; IMG reference gene:2503008266; PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family.
  
     0.723
Dalk_1946
PFAM: regulatory protein TetR; KEGG: dol:Dole_0457 TetR family transcriptional regulator; IMG reference gene:2503007663; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.707
Dalk_0103
PFAM: regulatory protein TetR; KEGG: hmo:HM1_0226 TetR family transcriptional regulator; IMG reference gene:2503005798; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.706
Dalk_1158
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: ppr:PBPRB1369 hypothetical protein; IMG reference gene:2503006860; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.698
Dalk_4463
PFAM: regulatory protein TetR; KEGG: dol:Dole_0228 TetR family transcriptional regulator; IMG reference gene:2503010214; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.692
Dalk_2493
PFAM: regulatory protein TetR; KEGG: dol:Dole_0457 TetR family transcriptional regulator; IMG reference gene:2503008214; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.690
Dalk_3795
PFAM: regulatory protein TetR; KEGG: bpu:BPUM_2512 transcriptional regulator; IMG reference gene:2503009539; PFAM: Bacterial regulatory proteins, tetR family; YsiA-like protein, C-terminal region.
  
     0.689
Dalk_1395
PFAM: regulatory protein TetR; KEGG: dth:DICTH_0060 transcriptional regulator, AcrR family; IMG reference gene:2503007100; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.686
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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