close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_5083PFAM: phosphate-selective porin O and P; KEGG: mca:MCA0900 hypothetical protein; IMG reference gene:2503010842; PFAM: Phosphate-selective porin O and P. (519 aa)    
Predicted Functional Partners:
Dalk_1182
PFAM: OmpW family protein; KEGG: mmr:Mmar10_0595 OmpW family protein; IMG reference gene:2503006884; PFAM: OmpW family.
     
 0.641
Dalk_1780
PFAM: OmpW family protein; KEGG: bra:BRADO6590 putative outer membrane protein precursor; IMG reference gene:2503007491; PFAM: OmpW family.
     
 0.641
Dalk_2948
PFAM: OmpW family protein; KEGG: pca:Pcar_2378 putative outer membrane protein; IMG reference gene:2503008674; PFAM: OmpW family.
     
 0.641
Dalk_0231
PFAM: protein of unknown function DUF748; KEGG: dar:Daro_1599 hypothetical protein; IMG reference gene:2503005927; PFAM: Domain of Unknown Function (DUF748).
  
  
 0.603
Dalk_5084
KEGG: sat:SYN_01957 hypothetical protein; IMG reference gene:2503010843.
       0.590
Dalk_2491
PFAM: OmpA/MotB domain protein; SMART: von Willebrand factor type A; KEGG: sat:SYN_00198 outer membrane porin protein; IMG reference gene:2503008212; PFAM: von Willebrand factor type A domain; OmpA family.
  
  
 0.579
Dalk_0230
PFAM: OmpA/MotB domain protein; KEGG: sat:SYN_00198 outer membrane porin protein; IMG reference gene:2503005926; PFAM: von Willebrand factor type A domain; OmpA family.
  
  
 0.537
Dalk_0310
OmpA/MotB domain protein; PFAM: von Willebrand factor type A; OmpA/MotB domain protein; KEGG: sat:SYN_00198 outer membrane porin protein; IMG reference gene:2503006007; PFAM: von Willebrand factor type A domain; OmpA family.
  
  
 0.531
Dalk_1041
PFAM: OmpA/MotB domain protein; KEGG: dol:Dole_1995 OmpA/MotB domain-containing protein; IMG reference gene:2503006742; PFAM: OmpA family.
     
 0.460
Dalk_3147
PFAM: OmpA/MotB domain protein; KEGG: dol:Dole_2209 peptidoglycan-associated lipoprotein; IMG reference gene:2503008876; PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein.
     
 0.460
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.