STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_5103Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cbo:CBO1759 methyltransferase; IMG reference gene:2503010862; PFAM: Methyltransferase domain. (201 aa)    
Predicted Functional Partners:
Dalk_1662
Methyltransferase type 12; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: gme:Gmet_0456 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like; IMG reference gene:2503007372; PFAM: Methyltransferase domain.
 
 0.809
Dalk_1043
KEGG: rpt:Rpal_3594 hypothetical protein; IMG reference gene:2503006744; PFAM: Methyltransferase domain.
   
 0.764
Dalk_3099
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: she:Shewmr4_1722 methyltransferase type 12; IMG reference gene:2503008828; PFAM: Methyltransferase domain.
   
 0.764
Dalk_3686
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: det:DET0680 hypothetical protein; IMG reference gene:2503009430; PFAM: Methyltransferase domain.
   
 0.764
Dalk_4755
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_4293 glycosyl transferase family protein; IMG reference gene:2503010512; PFAM: Methyltransferase domain.
   
 0.764
Dalk_5104
KEGG: dol:Dole_1681 hypothetical protein; IMG reference gene:2503010863.
       0.714
Dalk_0763
KEGG: dol:Dole_0682 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; IMG reference gene:2503006464; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase.
  
 
 0.664
Dalk_1056
TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: ava:Ava_2590 beta-ketoacyl synthase; IMG reference gene:2503006757; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA.
    
 0.598
Dalk_4499
TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: dps:DP1332 2-heptaprenyl-1,4-naphthoquinone methyltransferase; IMG reference gene:2503010250; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases.
  
     0.584
Dalk_0098
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mac:MA2730 hypothetical protein; IMG reference gene:2503005793; PFAM: Methyltransferase domain.
  
     0.571
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.