STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_5231Hypothetical protein Dalk_5231; IMG reference gene:2503010991. (80 aa)    
Predicted Functional Partners:
Dalk_5230
KEGG: ppg:PputGB1_1758 hypothetical protein; IMG reference gene:2503010990.
       0.773
Dalk_5232
Hypothetical protein Dalk_5232; KEGG: LOC490814; similar to chromosome 14 open reading frame 145; IMG reference gene:2503010992.
       0.737
Dalk_5233
Hypothetical protein Dalk_5233; IMG reference gene:2503010993.
       0.737
Dalk_5234
Hypothetical protein Dalk_5234; IMG reference gene:2503010994.
       0.680
Dalk_5235
Hypothetical protein Dalk_5235; IMG reference gene:2503010995.
       0.649
Dalk_5236
Hypothetical protein Dalk_5236; IMG reference gene:2503010996.
       0.649
Dalk_5237
Phage protein; KEGG: spb:M28_Spy1846 phage protein; IMG reference gene:2503010997.
       0.649
Dalk_5238
Hypothetical protein Dalk_5238; IMG reference gene:2503010998.
       0.632
Dalk_5239
Hypothetical protein Dalk_5239; IMG reference gene:2503010999.
       0.632
Dalk_5240
KEGG: mgm:Mmc1_2665 hypothetical protein; IMG reference gene:2503011000.
       0.470
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.