STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG41123.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (318 aa)    
Predicted Functional Partners:
SHG41146.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.981
SHG91357.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.967
SHH57771.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.954
SHG41101.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family.
 
  
 0.945
SHG91290.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 0.935
SHH57704.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.933
SHH38056.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.923
SHH28246.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.917
SHH37985.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.791
SHH28179.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.774
Your Current Organism:
Halobaculum gomorrense
NCBI taxonomy Id: 43928
Other names: ATCC 700876, DSM 9297, H. gomorrense, JCM 9908, strain DS2807
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.