Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHG43173.1 | SHG43198.1 | SAMN05443636_0238 | SAMN05443636_0239 | Na+-driven multidrug efflux pump. | Putative efflux protein, MATE family. | 0.544 |
| SHG43173.1 | SHG47045.1 | SAMN05443636_0238 | SAMN05443636_0356 | Na+-driven multidrug efflux pump. | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.493 |
| SHG43173.1 | SHG57698.1 | SAMN05443636_0238 | SAMN05443636_0691 | Na+-driven multidrug efflux pump. | Phytoene synthase. | 0.513 |
| SHG43173.1 | SHH20933.1 | SAMN05443636_0238 | SAMN05443636_2041 | Na+-driven multidrug efflux pump. | Farnesyl-diphosphate farnesyltransferase. | 0.513 |
| SHG43173.1 | gap | SAMN05443636_0238 | SAMN05443636_0506 | Na+-driven multidrug efflux pump. | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | 0.493 |
| SHG43173.1 | tbp | SAMN05443636_0238 | SAMN05443636_1726 | Na+-driven multidrug efflux pump. | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.514 |
| SHG43173.1 | tbp-2 | SAMN05443636_0238 | SAMN05443636_2870 | Na+-driven multidrug efflux pump. | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.514 |
| SHG43198.1 | SHG43173.1 | SAMN05443636_0239 | SAMN05443636_0238 | Putative efflux protein, MATE family. | Na+-driven multidrug efflux pump. | 0.544 |
| SHG43198.1 | SHG47045.1 | SAMN05443636_0239 | SAMN05443636_0356 | Putative efflux protein, MATE family. | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.493 |
| SHG43198.1 | SHG57698.1 | SAMN05443636_0239 | SAMN05443636_0691 | Putative efflux protein, MATE family. | Phytoene synthase. | 0.513 |
| SHG43198.1 | SHH20933.1 | SAMN05443636_0239 | SAMN05443636_2041 | Putative efflux protein, MATE family. | Farnesyl-diphosphate farnesyltransferase. | 0.513 |
| SHG43198.1 | gap | SAMN05443636_0239 | SAMN05443636_0506 | Putative efflux protein, MATE family. | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | 0.493 |
| SHG43198.1 | tbp | SAMN05443636_0239 | SAMN05443636_1726 | Putative efflux protein, MATE family. | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.514 |
| SHG43198.1 | tbp-2 | SAMN05443636_0239 | SAMN05443636_2870 | Putative efflux protein, MATE family. | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.514 |
| SHG47045.1 | SHG43173.1 | SAMN05443636_0356 | SAMN05443636_0238 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Na+-driven multidrug efflux pump. | 0.493 |
| SHG47045.1 | SHG43198.1 | SAMN05443636_0356 | SAMN05443636_0239 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Putative efflux protein, MATE family. | 0.493 |
| SHG47045.1 | SHG57698.1 | SAMN05443636_0356 | SAMN05443636_0691 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Phytoene synthase. | 0.619 |
| SHG47045.1 | SHH20933.1 | SAMN05443636_0356 | SAMN05443636_2041 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Farnesyl-diphosphate farnesyltransferase. | 0.619 |
| SHG47045.1 | gap | SAMN05443636_0356 | SAMN05443636_0506 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+). | 0.877 |
| SHG47045.1 | tbp | SAMN05443636_0356 | SAMN05443636_1726 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.595 |
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