Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG49498.1 | SHG58630.1 | SAMN05443636_0426 | SAMN05443636_0718 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | LSU ribosomal protein L6P. | 0.591 |
SHG49498.1 | SHG91640.1 | SAMN05443636_0426 | SAMN05443636_1311 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glycerate 2-kinase. | 0.625 |
SHG49498.1 | SHG92632.1 | SAMN05443636_0426 | SAMN05443636_1335 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glyoxylase, beta-lactamase superfamily II. | 0.615 |
SHG49498.1 | SHG95020.1 | SAMN05443636_0426 | SAMN05443636_1404 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glyoxylase, beta-lactamase superfamily II. | 0.624 |
SHG49498.1 | SHG95198.1 | SAMN05443636_0426 | SAMN05443636_1409 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glyoxylase, beta-lactamase superfamily II. | 0.610 |
SHG49498.1 | SHH11944.1 | SAMN05443636_0426 | SAMN05443636_1849 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.581 |
SHG49498.1 | SHH35833.1 | SAMN05443636_0426 | SAMN05443636_2405 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | FAD/FMN-containing dehydrogenase. | 0.748 |
SHG49498.1 | SHH36179.1 | SAMN05443636_0426 | SAMN05443636_2415 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine aminotransferase, putative. | 0.559 |
SHG49498.1 | SHH53342.1 | SAMN05443636_0426 | SAMN05443636_2814 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Acetolactate synthase, small subunit. | 0.597 |
SHG49498.1 | udk | SAMN05443636_0426 | SAMN05443636_3259 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Uridine kinase. | 0.698 |
SHG58630.1 | SHG49498.1 | SAMN05443636_0718 | SAMN05443636_0426 | LSU ribosomal protein L6P. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.591 |
SHG58630.1 | SHH11944.1 | SAMN05443636_0718 | SAMN05443636_1849 | LSU ribosomal protein L6P. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.526 |
SHG91640.1 | SHG49498.1 | SAMN05443636_1311 | SAMN05443636_0426 | Glycerate 2-kinase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.625 |
SHG91640.1 | SHH11944.1 | SAMN05443636_1311 | SAMN05443636_1849 | Glycerate 2-kinase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.537 |
SHG91640.1 | SHH36179.1 | SAMN05443636_1311 | SAMN05443636_2415 | Glycerate 2-kinase. | Phosphoserine aminotransferase, putative. | 0.401 |
SHG92632.1 | SHG49498.1 | SAMN05443636_1335 | SAMN05443636_0426 | Glyoxylase, beta-lactamase superfamily II. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.615 |
SHG92632.1 | SHG95020.1 | SAMN05443636_1335 | SAMN05443636_1404 | Glyoxylase, beta-lactamase superfamily II. | Glyoxylase, beta-lactamase superfamily II. | 0.624 |
SHG92632.1 | SHG95198.1 | SAMN05443636_1335 | SAMN05443636_1409 | Glyoxylase, beta-lactamase superfamily II. | Glyoxylase, beta-lactamase superfamily II. | 0.589 |
SHG92632.1 | SHH11944.1 | SAMN05443636_1335 | SAMN05443636_1849 | Glyoxylase, beta-lactamase superfamily II. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.613 |
SHG95020.1 | SHG49498.1 | SAMN05443636_1404 | SAMN05443636_0426 | Glyoxylase, beta-lactamase superfamily II. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.624 |
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