STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG51434.1LAO/AO transport system kinase. (354 aa)    
Predicted Functional Partners:
SHG51458.1
methylmalonyl-CoA mutase, C-terminal domain.
  
 0.994
SHH22088.1
methylmalonyl-CoA mutase.
  
 0.985
SHH67321.1
methylmalonyl-CoA mutase.
  
 0.985
SHH22057.1
methylmalonyl-CoA epimerase.
 
   
 0.645
SHG51490.1
GAF domain-containing protein.
       0.520
SHG55416.1
Iron complex transport system substrate-binding protein.
 
  
 0.426
Your Current Organism:
Halobaculum gomorrense
NCBI taxonomy Id: 43928
Other names: ATCC 700876, DSM 9297, H. gomorrense, JCM 9908, strain DS2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.