STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG55385.1Transcriptional regulator, ArsR family. (88 aa)    
Predicted Functional Partners:
SHG98615.1
Regulatory protein, arsR family.
  
     0.594
SHG83523.1
Uncharacterized conserved protein YbaR, Trm112 family.
  
     0.591
SHG42438.1
Ribbon-helix-helix protein, copG family.
  
     0.587
pan
Proteasome-activating nucleotidase; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase- [...]
       0.578
SHG55325.1
Hypothetical protein.
 
     0.567
SHG96776.1
Hypothetical protein.
  
     0.561
SHG53502.1
Predicted transcriptional regulator, containsd two HTH domains.
  
     0.560
SHH51072.1
Hypothetical protein.
  
     0.533
SHH63306.1
Small ribosomal subunit Rsm22.
  
     0.530
SHG43885.1
Hypothetical protein.
  
     0.525
Your Current Organism:
Halobaculum gomorrense
NCBI taxonomy Id: 43928
Other names: ATCC 700876, DSM 9297, H. gomorrense, JCM 9908, strain DS2807
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.