STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG70868.1HalX domain-containing protein. (197 aa)    
Predicted Functional Partners:
SHH04071.1
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.864
SHG69724.1
Signal transduction histidine kinase.
  
  
 0.798
SHG79748.1
Methyl-accepting chemotaxis protein.
  
 0.770
SHG70932.1
PAS domain S-box-containing protein.
  
 
  0.757
SHH04041.1
Response regulator receiver domain-containing protein.
  
 
   0.727
SHH11412.1
CheW protein.
  
 0.707
SHH01479.1
PAS domain S-box-containing protein.
  
     0.681
SHG41434.1
Methyl-accepting chemotaxis protein.
   
 0.679
SHH24507.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
  0.636
SHG77094.1
Signal transduction histidine kinase.
  
 
   0.620
Your Current Organism:
Halobaculum gomorrense
NCBI taxonomy Id: 43928
Other names: ATCC 700876, DSM 9297, H. gomorrense, JCM 9908, strain DS2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.