STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG78063.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
SHG77995.1
Hypothetical protein.
       0.773
SHG78030.1
Hypothetical protein.
       0.773
SHG78094.1
Hypothetical protein.
       0.566
SHG78127.1
Hypothetical protein.
       0.566
SHG77957.1
Hypothetical protein.
       0.528
SHG78156.1
Hypothetical protein.
       0.476
SHG78186.1
Hypothetical protein.
       0.476
SHG78218.1
Hypothetical protein.
       0.476
Your Current Organism:
Halobaculum gomorrense
NCBI taxonomy Id: 43928
Other names: ATCC 700876, DSM 9297, H. gomorrense, JCM 9908, strain DS2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.