Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG51853.1 | SHG80265.1 | SAMN05443636_0501 | SAMN05443636_1128 | 2-keto-3-deoxygluconate kinase. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.946 |
SHG51853.1 | SHG84022.1 | SAMN05443636_0501 | SAMN05443636_1245 | 2-keto-3-deoxygluconate kinase. | Fructokinase. | 0.608 |
SHG80241.1 | SHG80265.1 | SAMN05443636_1127 | SAMN05443636_1128 | Hypothetical protein. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.565 |
SHG80241.1 | SHG80295.1 | SAMN05443636_1127 | SAMN05443636_1129 | Hypothetical protein. | Hypothetical protein. | 0.411 |
SHG80265.1 | SHG51853.1 | SAMN05443636_1128 | SAMN05443636_0501 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 2-keto-3-deoxygluconate kinase. | 0.946 |
SHG80265.1 | SHG80241.1 | SAMN05443636_1128 | SAMN05443636_1127 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Hypothetical protein. | 0.565 |
SHG80265.1 | SHG80295.1 | SAMN05443636_1128 | SAMN05443636_1129 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Hypothetical protein. | 0.545 |
SHG80265.1 | SHG84022.1 | SAMN05443636_1128 | SAMN05443636_1245 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Fructokinase. | 0.556 |
SHG80265.1 | SHH26349.1 | SAMN05443636_1128 | SAMN05443636_2218 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Ribokinase/sulfofructose kinase. | 0.431 |
SHG80265.1 | SHH58415.1 | SAMN05443636_1128 | SAMN05443636_2932 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.710 |
SHG80295.1 | SHG80241.1 | SAMN05443636_1129 | SAMN05443636_1127 | Hypothetical protein. | Hypothetical protein. | 0.411 |
SHG80295.1 | SHG80265.1 | SAMN05443636_1129 | SAMN05443636_1128 | Hypothetical protein. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.545 |
SHG84022.1 | SHG51853.1 | SAMN05443636_1245 | SAMN05443636_0501 | Fructokinase. | 2-keto-3-deoxygluconate kinase. | 0.608 |
SHG84022.1 | SHG80265.1 | SAMN05443636_1245 | SAMN05443636_1128 | Fructokinase. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.556 |
SHH26349.1 | SHG80265.1 | SAMN05443636_2218 | SAMN05443636_1128 | Ribokinase/sulfofructose kinase. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.431 |
SHH58415.1 | SHG80265.1 | SAMN05443636_2932 | SAMN05443636_1128 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.710 |