Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG53961.1 | SHG53994.1 | SAMN05443636_0569 | SAMN05443636_0570 | Fe-S cluster assembly ATP-binding protein. | Iron-regulated ABC transporter membrane component SufB. | 0.999 |
SHG53961.1 | SHG54020.1 | SAMN05443636_0569 | SAMN05443636_0571 | Fe-S cluster assembly ATP-binding protein. | Iron-regulated ABC transporter permease protein SufD. | 0.998 |
SHG53961.1 | SHG95377.1 | SAMN05443636_0569 | SAMN05443636_1414 | Fe-S cluster assembly ATP-binding protein. | Selenocysteine lyase/Cysteine desulfurase. | 0.876 |
SHG53961.1 | SHH08981.1 | SAMN05443636_0569 | SAMN05443636_1742 | Fe-S cluster assembly ATP-binding protein. | Cysteine desulfurase. | 0.916 |
SHG53961.1 | SHH09010.1 | SAMN05443636_0569 | SAMN05443636_1743 | Fe-S cluster assembly ATP-binding protein. | Nitrogen fixation protein NifU. | 0.980 |
SHG53961.1 | SHH25950.1 | SAMN05443636_0569 | SAMN05443636_2205 | Fe-S cluster assembly ATP-binding protein. | Selenocysteine lyase/Cysteine desulfurase. | 0.884 |
SHG53994.1 | SHG53961.1 | SAMN05443636_0570 | SAMN05443636_0569 | Iron-regulated ABC transporter membrane component SufB. | Fe-S cluster assembly ATP-binding protein. | 0.999 |
SHG53994.1 | SHG54020.1 | SAMN05443636_0570 | SAMN05443636_0571 | Iron-regulated ABC transporter membrane component SufB. | Iron-regulated ABC transporter permease protein SufD. | 0.831 |
SHG53994.1 | SHG95377.1 | SAMN05443636_0570 | SAMN05443636_1414 | Iron-regulated ABC transporter membrane component SufB. | Selenocysteine lyase/Cysteine desulfurase. | 0.841 |
SHG53994.1 | SHH08981.1 | SAMN05443636_0570 | SAMN05443636_1742 | Iron-regulated ABC transporter membrane component SufB. | Cysteine desulfurase. | 0.888 |
SHG53994.1 | SHH09010.1 | SAMN05443636_0570 | SAMN05443636_1743 | Iron-regulated ABC transporter membrane component SufB. | Nitrogen fixation protein NifU. | 0.891 |
SHG53994.1 | SHH25950.1 | SAMN05443636_0570 | SAMN05443636_2205 | Iron-regulated ABC transporter membrane component SufB. | Selenocysteine lyase/Cysteine desulfurase. | 0.847 |
SHG54020.1 | SHG53961.1 | SAMN05443636_0571 | SAMN05443636_0569 | Iron-regulated ABC transporter permease protein SufD. | Fe-S cluster assembly ATP-binding protein. | 0.998 |
SHG54020.1 | SHG53994.1 | SAMN05443636_0571 | SAMN05443636_0570 | Iron-regulated ABC transporter permease protein SufD. | Iron-regulated ABC transporter membrane component SufB. | 0.831 |
SHG54020.1 | SHG95377.1 | SAMN05443636_0571 | SAMN05443636_1414 | Iron-regulated ABC transporter permease protein SufD. | Selenocysteine lyase/Cysteine desulfurase. | 0.843 |
SHG54020.1 | SHH08981.1 | SAMN05443636_0571 | SAMN05443636_1742 | Iron-regulated ABC transporter permease protein SufD. | Cysteine desulfurase. | 0.893 |
SHG54020.1 | SHH09010.1 | SAMN05443636_0571 | SAMN05443636_1743 | Iron-regulated ABC transporter permease protein SufD. | Nitrogen fixation protein NifU. | 0.891 |
SHG54020.1 | SHH25950.1 | SAMN05443636_0571 | SAMN05443636_2205 | Iron-regulated ABC transporter permease protein SufD. | Selenocysteine lyase/Cysteine desulfurase. | 0.850 |
SHG83845.1 | SHG91499.1 | SAMN05443636_1240 | SAMN05443636_1306 | Thioredoxin reductase (NADPH). | Pyridine nucleotide-disulphide oxidoreductase. | 0.709 |
SHG83845.1 | SHG95377.1 | SAMN05443636_1240 | SAMN05443636_1414 | Thioredoxin reductase (NADPH). | Selenocysteine lyase/Cysteine desulfurase. | 0.765 |
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