STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH12022.1Predicted transcriptional regulator. (129 aa)    
Predicted Functional Partners:
SHH12047.1
Hypothetical protein.
       0.533
SHH11998.1
L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
       0.525
SHG94690.1
Hypothetical protein.
  
     0.501
SHG51821.1
DnaJ domain-containing protein.
  
     0.478
SHH35866.1
Hypothetical protein.
  
     0.451
SHH20836.1
Hypothetical protein.
  
     0.401
SHH53105.1
TIGR00288 family protein.
  
     0.400
Your Current Organism:
Halobaculum gomorrense
NCBI taxonomy Id: 43928
Other names: ATCC 700876, DSM 9297, H. gomorrense, JCM 9908, strain DS2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.