STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH24935.1Transposase, IS605 OrfB family, central region. (349 aa)    
Predicted Functional Partners:
SHG90680.1
Putative transposase.
 
    0.648
SHG58125.1
Transposase.
  
     0.645
SHH08376.1
STE24 endopeptidase.
  
     0.583
SHH04071.1
PAS/PAC sensor hybrid histidine kinase.
  
     0.483
SHH24908.1
SprT-like family protein.
       0.475
SHG40477.1
Transcriptional regulator, TetR family.
  
     0.413
Your Current Organism:
Halobaculum gomorrense
NCBI taxonomy Id: 43928
Other names: ATCC 700876, DSM 9297, H. gomorrense, JCM 9908, strain DS2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.