Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHH26679.1 | SHH26717.1 | SAMN05443636_2228 | SAMN05443636_2229 | cation:H+ antiporter. | RecA-superfamily ATPase, KaiC/GvpD/RAD55 family. | 0.553 |
SHH26679.1 | SHH26754.1 | SAMN05443636_2228 | SAMN05443636_2230 | cation:H+ antiporter. | Septum site-determining protein MinD. | 0.475 |
SHH26679.1 | SHH26788.1 | SAMN05443636_2228 | SAMN05443636_2231 | cation:H+ antiporter. | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development). | 0.428 |
SHH26679.1 | SHH46155.1 | SAMN05443636_2228 | SAMN05443636_2652 | cation:H+ antiporter. | Sodium/proton antiporter, CPA1 family. | 0.689 |
SHH26679.1 | dtdA | SAMN05443636_2228 | SAMN05443636_1983 | cation:H+ antiporter. | D-aminoacyl-tRNA deacylase; D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo. | 0.403 |
SHH26717.1 | SHH26679.1 | SAMN05443636_2229 | SAMN05443636_2228 | RecA-superfamily ATPase, KaiC/GvpD/RAD55 family. | cation:H+ antiporter. | 0.553 |
SHH26717.1 | SHH26754.1 | SAMN05443636_2229 | SAMN05443636_2230 | RecA-superfamily ATPase, KaiC/GvpD/RAD55 family. | Septum site-determining protein MinD. | 0.767 |
SHH26717.1 | SHH26788.1 | SAMN05443636_2229 | SAMN05443636_2231 | RecA-superfamily ATPase, KaiC/GvpD/RAD55 family. | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development). | 0.455 |
SHH26754.1 | SHH26679.1 | SAMN05443636_2230 | SAMN05443636_2228 | Septum site-determining protein MinD. | cation:H+ antiporter. | 0.475 |
SHH26754.1 | SHH26717.1 | SAMN05443636_2230 | SAMN05443636_2229 | Septum site-determining protein MinD. | RecA-superfamily ATPase, KaiC/GvpD/RAD55 family. | 0.767 |
SHH26754.1 | SHH26788.1 | SAMN05443636_2230 | SAMN05443636_2231 | Septum site-determining protein MinD. | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development). | 0.561 |
SHH26788.1 | SHH26679.1 | SAMN05443636_2231 | SAMN05443636_2228 | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development). | cation:H+ antiporter. | 0.428 |
SHH26788.1 | SHH26717.1 | SAMN05443636_2231 | SAMN05443636_2229 | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development). | RecA-superfamily ATPase, KaiC/GvpD/RAD55 family. | 0.455 |
SHH26788.1 | SHH26754.1 | SAMN05443636_2231 | SAMN05443636_2230 | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development). | Septum site-determining protein MinD. | 0.561 |
SHH46155.1 | SHH26679.1 | SAMN05443636_2652 | SAMN05443636_2228 | Sodium/proton antiporter, CPA1 family. | cation:H+ antiporter. | 0.689 |
dtdA | SHH26679.1 | SAMN05443636_1983 | SAMN05443636_2228 | D-aminoacyl-tRNA deacylase; D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo. | cation:H+ antiporter. | 0.403 |