Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG80212.1 | SHH27183.1 | SAMN05443636_1126 | SAMN05443636_2242 | Mechanosensitive ion channel. | Conserved TM helix. | 0.583 |
SHG80212.1 | SHH46155.1 | SAMN05443636_1126 | SAMN05443636_2652 | Mechanosensitive ion channel. | Sodium/proton antiporter, CPA1 family. | 0.531 |
SHG80212.1 | SHH46471.1 | SAMN05443636_1126 | SAMN05443636_2661 | Mechanosensitive ion channel. | Nonsense-mediated mRNA decay protein 3. | 0.515 |
SHG80212.1 | SHH70357.1 | SAMN05443636_1126 | SAMN05443636_3247 | Mechanosensitive ion channel. | Small-conductance mechanosensitive channel. | 0.440 |
SHH20994.1 | SHH27183.1 | SAMN05443636_2043 | SAMN05443636_2242 | Mechanosensitive ion channel. | Conserved TM helix. | 0.582 |
SHH20994.1 | SHH46155.1 | SAMN05443636_2043 | SAMN05443636_2652 | Mechanosensitive ion channel. | Sodium/proton antiporter, CPA1 family. | 0.542 |
SHH20994.1 | SHH46471.1 | SAMN05443636_2043 | SAMN05443636_2661 | Mechanosensitive ion channel. | Nonsense-mediated mRNA decay protein 3. | 0.515 |
SHH20994.1 | SHH70357.1 | SAMN05443636_2043 | SAMN05443636_3247 | Mechanosensitive ion channel. | Small-conductance mechanosensitive channel. | 0.444 |
SHH27183.1 | SHG80212.1 | SAMN05443636_2242 | SAMN05443636_1126 | Conserved TM helix. | Mechanosensitive ion channel. | 0.583 |
SHH27183.1 | SHH20994.1 | SAMN05443636_2242 | SAMN05443636_2043 | Conserved TM helix. | Mechanosensitive ion channel. | 0.582 |
SHH27183.1 | SHH33275.1 | SAMN05443636_2242 | SAMN05443636_2331 | Conserved TM helix. | Small-conductance mechanosensitive channel. | 0.636 |
SHH27183.1 | SHH46155.1 | SAMN05443636_2242 | SAMN05443636_2652 | Conserved TM helix. | Sodium/proton antiporter, CPA1 family. | 0.479 |
SHH27183.1 | SHH46471.1 | SAMN05443636_2242 | SAMN05443636_2661 | Conserved TM helix. | Nonsense-mediated mRNA decay protein 3. | 0.579 |
SHH27183.1 | SHH70357.1 | SAMN05443636_2242 | SAMN05443636_3247 | Conserved TM helix. | Small-conductance mechanosensitive channel. | 0.467 |
SHH27183.1 | dacZ | SAMN05443636_2242 | SAMN05443636_2243 | Conserved TM helix. | Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation. | 0.873 |
SHH33275.1 | SHH27183.1 | SAMN05443636_2331 | SAMN05443636_2242 | Small-conductance mechanosensitive channel. | Conserved TM helix. | 0.636 |
SHH33275.1 | SHH46155.1 | SAMN05443636_2331 | SAMN05443636_2652 | Small-conductance mechanosensitive channel. | Sodium/proton antiporter, CPA1 family. | 0.479 |
SHH33275.1 | SHH46471.1 | SAMN05443636_2331 | SAMN05443636_2661 | Small-conductance mechanosensitive channel. | Nonsense-mediated mRNA decay protein 3. | 0.573 |
SHH33275.1 | SHH70357.1 | SAMN05443636_2331 | SAMN05443636_3247 | Small-conductance mechanosensitive channel. | Small-conductance mechanosensitive channel. | 0.454 |
SHH46155.1 | SHG80212.1 | SAMN05443636_2652 | SAMN05443636_1126 | Sodium/proton antiporter, CPA1 family. | Mechanosensitive ion channel. | 0.531 |
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