STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH34513.1Hypothetical protein. (258 aa)    
Predicted Functional Partners:
SHH34476.1
triphosphoribosyl-dephospho-CoA synthase.
 
     0.938
SHH34441.1
TIM-barrel protein, putative.
 
     0.908
cofD
LPPG:FO 2-phospho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
       0.830
rps17e
Small subunit ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.
 
     0.768
SHH31880.1
Flagellar protein FlaJ.
  
     0.738
SHH21233.1
Protein of unknown function.
  
     0.723
SHH14099.1
Predicted nucleic acid-binding protein, contains Zn-finger domain.
  
     0.703
SHH03336.1
Predicted DNA binding protein, contains HTH domain.
  
     0.684
SHH56279.1
Biotin transport system permease protein.
  
    0.677
SHG51821.1
DnaJ domain-containing protein.
  
     0.675
Your Current Organism:
Halobaculum gomorrense
NCBI taxonomy Id: 43928
Other names: ATCC 700876, DSM 9297, H. gomorrense, JCM 9908, strain DS2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.