STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH34793.1Ribose 1,5-bisphosphate isomerase; Belongs to the eIF-2B alpha/beta/delta subunits family. (336 aa)    
Predicted Functional Partners:
SHG53274.1
Translation initiation factor 2 subunit alpha (aeIF-2a).
   
 0.955
eif2g
Translation initiation factor 2 subunit gamma (aeIF-2g); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily.
   
 0.840
SHH34758.1
Ribokinase; Belongs to the carbohydrate kinase PfkB family.
     
 0.823
SHH54226.1
Elongation factor 1-alpha.
   
 0.822
SHG37377.1
Glucose-1-phosphate thymidylyltransferase.
   
 0.698
SHG38111.1
Glucose-1-phosphate thymidylyltransferase.
   
 0.698
SHG38217.1
Bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase.
   
 0.698
SHG97417.1
Glucose-1-phosphate thymidylyltransferase.
   
 0.698
SHG53929.1
DNA polymerase I.
    
   0.677
SHH34688.1
Hypothetical protein.
       0.548
Your Current Organism:
Halobaculum gomorrense
NCBI taxonomy Id: 43928
Other names: ATCC 700876, DSM 9297, H. gomorrense, JCM 9908, strain DS2807
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.