Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG96305.1 | SHH37563.1 | SAMN05443636_1445 | SAMN05443636_2455 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | 0.697 |
SHG96305.1 | SHH52172.1 | SAMN05443636_1445 | SAMN05443636_2777 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Uridine phosphorylase. | 0.643 |
SHG96305.1 | SHH64196.1 | SAMN05443636_1445 | SAMN05443636_3073 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Cytidine deaminase. | 0.718 |
SHG96305.1 | SHH64248.1 | SAMN05443636_1445 | SAMN05443636_3075 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Uridine phosphorylase. | 0.643 |
SHG96305.1 | tdk | SAMN05443636_1445 | SAMN05443636_2491 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Thymidine kinase. | 0.652 |
SHG96305.1 | udk | SAMN05443636_1445 | SAMN05443636_3259 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Uridine kinase. | 0.787 |
SHG96305.1 | upp | SAMN05443636_1445 | SAMN05443636_1809 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.784 |
SHH37563.1 | SHG96305.1 | SAMN05443636_2455 | SAMN05443636_1445 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.697 |
SHH37563.1 | SHH52172.1 | SAMN05443636_2455 | SAMN05443636_2777 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | Uridine phosphorylase. | 0.581 |
SHH37563.1 | SHH64196.1 | SAMN05443636_2455 | SAMN05443636_3073 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | Cytidine deaminase. | 0.716 |
SHH37563.1 | SHH64248.1 | SAMN05443636_2455 | SAMN05443636_3075 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | Uridine phosphorylase. | 0.581 |
SHH37563.1 | surE | SAMN05443636_2455 | SAMN05443636_1718 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.543 |
SHH37563.1 | surE-2 | SAMN05443636_2455 | SAMN05443636_2957 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.543 |
SHH37563.1 | tdk | SAMN05443636_2455 | SAMN05443636_2491 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | Thymidine kinase. | 0.682 |
SHH37563.1 | udk | SAMN05443636_2455 | SAMN05443636_3259 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | Uridine kinase. | 0.705 |
SHH37563.1 | upp | SAMN05443636_2455 | SAMN05443636_1809 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.584 |
SHH52172.1 | SHG96305.1 | SAMN05443636_2777 | SAMN05443636_1445 | Uridine phosphorylase. | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.643 |
SHH52172.1 | SHH37563.1 | SAMN05443636_2777 | SAMN05443636_2455 | Uridine phosphorylase. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | 0.581 |
SHH52172.1 | SHH64196.1 | SAMN05443636_2777 | SAMN05443636_3073 | Uridine phosphorylase. | Cytidine deaminase. | 0.988 |
SHH52172.1 | SHH64248.1 | SAMN05443636_2777 | SAMN05443636_3075 | Uridine phosphorylase. | Uridine phosphorylase. | 0.960 |
page 1 of 5