Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG44173.1 | SHH52477.1 | SAMN05443636_0270 | SAMN05443636_2787 | Prephenate dehydratase. | Cupin domain protein. | 0.486 |
SHG96856.1 | SHH23610.1 | SAMN05443636_1461 | SAMN05443636_2126 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Alkylhydroperoxidase AhpD family core domain-containing protein. | 0.856 |
SHG96856.1 | SHH52477.1 | SAMN05443636_1461 | SAMN05443636_2787 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Cupin domain protein. | 0.464 |
SHH23610.1 | SHG96856.1 | SAMN05443636_2126 | SAMN05443636_1461 | Alkylhydroperoxidase AhpD family core domain-containing protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.856 |
SHH23610.1 | SHH52477.1 | SAMN05443636_2126 | SAMN05443636_2787 | Alkylhydroperoxidase AhpD family core domain-containing protein. | Cupin domain protein. | 0.516 |
SHH52448.1 | SHH52477.1 | SAMN05443636_2786 | SAMN05443636_2787 | Hypothetical protein. | Cupin domain protein. | 0.592 |
SHH52477.1 | SHG44173.1 | SAMN05443636_2787 | SAMN05443636_0270 | Cupin domain protein. | Prephenate dehydratase. | 0.486 |
SHH52477.1 | SHG96856.1 | SAMN05443636_2787 | SAMN05443636_1461 | Cupin domain protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.464 |
SHH52477.1 | SHH23610.1 | SAMN05443636_2787 | SAMN05443636_2126 | Cupin domain protein. | Alkylhydroperoxidase AhpD family core domain-containing protein. | 0.516 |
SHH52477.1 | SHH52448.1 | SAMN05443636_2787 | SAMN05443636_2786 | Cupin domain protein. | Hypothetical protein. | 0.592 |