Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHG58597.1 | SHG58630.1 | SAMN05443636_0717 | SAMN05443636_0718 | LSU ribosomal protein L32E. | LSU ribosomal protein L6P. | 0.999 |
| SHG58597.1 | proS | SAMN05443636_0717 | SAMN05443636_2834 | LSU ribosomal protein L32E. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.999 |
| SHG58597.1 | rpl13 | SAMN05443636_0717 | SAMN05443636_2923 | LSU ribosomal protein L32E. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
| SHG58597.1 | rpl18 | SAMN05443636_0717 | SAMN05443636_0715 | LSU ribosomal protein L32E. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
| SHG58597.1 | rpl21e | SAMN05443636_0717 | SAMN05443636_2386 | LSU ribosomal protein L32E. | LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | 0.999 |
| SHG58597.1 | rpl23 | SAMN05443636_0717 | SAMN05443636_0732 | LSU ribosomal protein L32E. | LSU ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.999 |
| SHG58597.1 | rpl24e | SAMN05443636_0717 | SAMN05443636_2362 | LSU ribosomal protein L32E. | LSU ribosomal protein L24E; Binds to the 23S rRNA. | 0.999 |
| SHG58597.1 | rpl31e | SAMN05443636_0717 | SAMN05443636_1732 | LSU ribosomal protein L32E. | Large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family. | 0.999 |
| SHG58597.1 | rpl44e | SAMN05443636_0717 | SAMN05443636_0549 | LSU ribosomal protein L32E. | Large subunit ribosomal protein L44e; Binds to the 23S rRNA. | 0.999 |
| SHG58597.1 | rps9 | SAMN05443636_0717 | SAMN05443636_2922 | LSU ribosomal protein L32E. | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| SHG58630.1 | SHG58597.1 | SAMN05443636_0718 | SAMN05443636_0717 | LSU ribosomal protein L6P. | LSU ribosomal protein L32E. | 0.999 |
| SHG58630.1 | proS | SAMN05443636_0718 | SAMN05443636_2834 | LSU ribosomal protein L6P. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.989 |
| SHG58630.1 | rpl13 | SAMN05443636_0718 | SAMN05443636_2923 | LSU ribosomal protein L6P. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
| SHG58630.1 | rpl18 | SAMN05443636_0718 | SAMN05443636_0715 | LSU ribosomal protein L6P. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
| SHG58630.1 | rpl21e | SAMN05443636_0718 | SAMN05443636_2386 | LSU ribosomal protein L6P. | LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | 0.999 |
| SHG58630.1 | rpl23 | SAMN05443636_0718 | SAMN05443636_0732 | LSU ribosomal protein L6P. | LSU ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.999 |
| SHG58630.1 | rpl24e | SAMN05443636_0718 | SAMN05443636_2362 | LSU ribosomal protein L6P. | LSU ribosomal protein L24E; Binds to the 23S rRNA. | 0.999 |
| SHG58630.1 | rpl31e | SAMN05443636_0718 | SAMN05443636_1732 | LSU ribosomal protein L6P. | Large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family. | 0.999 |
| SHG58630.1 | rpl44e | SAMN05443636_0718 | SAMN05443636_0549 | LSU ribosomal protein L6P. | Large subunit ribosomal protein L44e; Binds to the 23S rRNA. | 0.999 |
| SHG58630.1 | rps9 | SAMN05443636_0718 | SAMN05443636_2922 | LSU ribosomal protein L6P. | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
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