STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH70117.1acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase. (390 aa)    
Predicted Functional Partners:
SHH70096.1
hydroxymethylglutaryl-CoA synthase.
 
 0.996
SHH15185.1
Hypothetical protein.
 
 0.949
SHH60879.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.923
SHH69296.1
3-hydroxyacyl-CoA dehydrogenase /Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.923
SHH51004.1
hydroxymethylglutaryl-CoA synthase.
  
 0.921
SHG52399.1
Hypothetical protein.
 
 0.860
SHH23397.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.856
SHG52564.1
acyl-CoA dehydrogenase.
   
  0.838
SHG93717.1
Acetyltransferase.
  
 
 0.834
SHG82647.1
acetyl-CoA synthetase.
  
 
 0.799
Your Current Organism:
Halobaculum gomorrense
NCBI taxonomy Id: 43928
Other names: ATCC 700876, DSM 9297, H. gomorrense, JCM 9908, strain DS2807
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