STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0168PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: csa:Csal_3169 substrate-binding region of ABC-type glycine betaine transport system. (313 aa)    
Predicted Functional Partners:
Bsel_0353
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dol:Dole_2764 binding-protein-dependent transport systems inner membrane component.
 
 0.998
Bsel_0354
TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: aeh:Mlg_0732 glycine betaine/L-proline ABC transporter, ATPase subunit; SMART: AAA ATPase; CBS domain containing protein.
 
 0.995
Bsel_0352
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: aeh:Mlg_0734 response regulator receiver protein.
  
  
 
0.916
Bsel_1379
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: csa:Csal_2886 substrate-binding region of ABC-type glycine betaine transport system.
  
  
 
0.909
Bsel_1918
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: aap:NT05HA_1064 glycine betaine.
 
 0.689
Bsel_0169
Transcriptional regulator protein-like protein; KEGG: rpf:Rpic12D_4272 hypothetical protein; Belongs to the GbsR family.
 
   
 0.660
Bsel_0170
KEGG: reu:Reut_B5835 aldehyde dehydrogenase (acceptor); TIGRFAM: betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase.
 
  
 0.400
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.